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   <dataset id="HF226">
      <alternateIdentifier system="https://doi.org">doi:10.6073/pasta/db695dd1bcd61ccc45fcf3a816b24ce3</alternateIdentifier>
      <title>Concentration and Age of Nonstructural Carbon Reserves in Two Trees at Harvard Forest 2012</title>
      <creator>
         <individualName>
            <givenName>Andrew</givenName>
            <surName>Richardson</surName>
         </individualName>
         <userId directory="https://orcid.org">https://orcid.org/0000-0002-0148-6714</userId>
      </creator>
      <pubDate>2023</pubDate>
      <language>English</language>
      <abstract>
         <section>
            <para>We know surprisingly little about whole-tree nonstructural carbon (NSC;
					primarily sugars and starch) budgets. Even less well understood is the mixing
					between recent photosynthetic assimilates (new NSC) and previously stored
					reserves. And, NSC turnover times are poorly constrained.</para>
            <para>We characterized the distribution of NSC in the stemwood, branches, and roots
					of two temperate trees, and we used the continuous label offered by the
					radiocarbon (14C) bomb spike to estimate the mean age of NSC in different
					tissues.</para>
            <para>NSC in branches and outermost stemwood growth rings had the 14C signature of
					the current growing season. However, NSC in older above- and below-ground
					tissues was enriched in 14C, indicating that it was produced from older
					assimilates. Radial patterns of 14C in stemwood NSC showed strong mixing of NSC
					across the youngest growth rings, with limited.</para>
         </section>
      </abstract>
      <keywordSet>
         <keyword>carbohydrates</keyword>
         <keyword>carbon</keyword>
         <keyword>tree physiology</keyword>
         <keywordThesaurus>LTER controlled vocabulary</keywordThesaurus>
      </keywordSet>
      <keywordSet>
         <keyword>primary production</keyword>
         <keywordThesaurus>LTER core area</keywordThesaurus>
      </keywordSet>
      <keywordSet>
         <keyword>Harvard Forest</keyword>
         <keyword>HFR</keyword>
         <keyword>LTER</keyword>
         <keyword>USA</keyword>
         <keywordThesaurus>HFR default</keywordThesaurus>
      </keywordSet>
      <intellectualRights>
         <section>
            <para>This dataset is released to the public under Creative Commons CC0 1.0 (No Rights Reserved). Please keep the dataset creators informed of any plans to use the dataset. Consultation with the original investigators is strongly encouraged. Publications and data products that make use of the dataset should include proper acknowledgement.</para>
         </section>
      </intellectualRights>
      <licensed>
         <licenseName>Creative Commons Zero v1.0 Universal</licenseName>
         <url>https://spdx.org/licenses/CC0-1.0.html</url>
         <identifier>CC0-1.0</identifier>
      </licensed>
      <distribution>
         <online>
            <url function="information">https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=hf226</url>
         </online>
      </distribution>
      <coverage>
         <geographicCoverage>
            <geographicDescription>Tom Swamp Tract (Harvard Forest). Coordinates based on WGS84 datum.</geographicDescription>
            <boundingCoordinates>
               <westBoundingCoordinate>-72.218</westBoundingCoordinate>
               <eastBoundingCoordinate>-72.218</eastBoundingCoordinate>
               <northBoundingCoordinate>+42.513</northBoundingCoordinate>
               <southBoundingCoordinate>+42.513</southBoundingCoordinate>
               <boundingAltitudes>
                  <altitudeMinimum>250</altitudeMinimum>
                  <altitudeMaximum>250</altitudeMaximum>
                  <altitudeUnits>meter</altitudeUnits>
               </boundingAltitudes>
            </boundingCoordinates>
         </geographicCoverage>
         <temporalCoverage>
            <rangeOfDates>
               <beginDate>
                  <calendarDate>2012</calendarDate>
               </beginDate>
               <endDate>
                  <calendarDate>2012</calendarDate>
               </endDate>
            </rangeOfDates>
         </temporalCoverage>
         <taxonomicCoverage>
            <taxonomicClassification>
               <taxonRankName>genus</taxonRankName>
               <taxonRankValue>Pinus</taxonRankValue>
               <taxonomicClassification>
                  <taxonRankName>species</taxonRankName>
                  <taxonRankValue>strobus</taxonRankValue>
                  <commonName>white pine</commonName>
               </taxonomicClassification>
            </taxonomicClassification>
            <taxonomicClassification>
               <taxonRankName>genus</taxonRankName>
               <taxonRankValue>Quercus</taxonRankValue>
               <taxonomicClassification>
                  <taxonRankName>species</taxonRankName>
                  <taxonRankValue>rubra</taxonRankValue>
                  <commonName>red oak</commonName>
               </taxonomicClassification>
            </taxonomicClassification>
         </taxonomicCoverage>
      </coverage>
      <maintenance>
         <description>
            <para>complete</para>
         </description>
      </maintenance>
      <contact scope="document">
         <positionName>Information Manager</positionName>
         <organizationName>Harvard Forest</organizationName>
         <address scope="document">
            <deliveryPoint>324 North Main Street</deliveryPoint>
            <city>Petersham</city>
            <administrativeArea>MA</administrativeArea>
            <postalCode>01366</postalCode>
            <country>USA</country>
         </address>
         <phone phonetype="voice">(978) 724-3302</phone>
         <electronicMailAddress>hf-im@lists.fas.harvard.edu</electronicMailAddress>
      </contact>
      <publisher scope="document">
         <organizationName>Harvard Forest</organizationName>
         <address scope="document">
            <deliveryPoint>324 North Main Street</deliveryPoint>
            <city>Petersham</city>
            <administrativeArea>MA</administrativeArea>
            <postalCode>01366</postalCode>
            <country>USA</country>
         </address>
         <phone phonetype="voice">(978) 724-3302</phone>
         <phone phonetype="fax">(978) 724-3595</phone>
         <onlineUrl>https://harvardforest.fas.harvard.edu</onlineUrl>
      </publisher>
      <methods>
         <methodStep>
            <description>
               <section>
                  <title>Field sampling</title>
                  <para>We selected one tree of each species for destructive harvesting. The
							main criteria for selection were (1) evidence of vigorous growth; and
							(2) a well-developed crown that was not overtopped by surrounding trees.
							The pine was 12 m high, 23 years of age, 18.5 cm diameter at breast
							height (DBH), and established following the harvest in 1990. The oak was
							20 m high, 30 years of age, and 17.0 cm DBH, and established following
							the thinning in 1983. Trees were felled and stemwood bolts (ca. 50 cm in
							length) collected at breast height, mid-way up the stem, and near the
							top of the stem. We also collected current-year twigs, as well as
							multi-year branches, from throughout the crown. We then partially
							excavated the stump and root system of each tree, and collected samples
							of large coarse roots (diameter greater than 5 cm), as well as medium
							coarse roots (approx. 1 cm) and fine roots (no more than 1 mm) that were
							directly attached to the large coarse roots (and thus undoubtedly from
							the same tree).</para>
                  <para>Samples were processed in the laboratory on the same day that they
							were collected in the field. Cookies, or stemwood sections approximately
							2 cm in thickness, were cut from the stemwood bolts. Using a hammer and
							chisel, we separated the outer bark and phloem, and then separated
							individual annual growth rings from each cookie. We identified the
							heartwood-sapwood transition based on wood color.</para>
                  <para>In the large and intermediate coarse roots we could not easily count
							rings. We therefore separated the large coarse root wood by thirds into
							three depths, with D1 denoting the outer (most recent) wood and D3 the
							center (oldest) wood. For all root samples, in lieu of ring counts we
							determined the mean age of the cellulose (i.e. structural C) via 14C
							analysis as described below.</para>
                  <para>Samples were frozen at -80 deg C and then freeze-dried (FreeZone 2.5,
							Labconco, Kansas City, MO USA, and Hybrid Vacuum Pump, Vacuubrand,
							Wertheim, Germany) before being homogenized and milled to 20 mesh (Wiley
							Mini Mill, Thomas Scientific, Swedesboro, NJ USA). Samples were then
							kept at -80 deg C until the NSC extraction was conducted. Additional
							sample material was kept frozen at -80 deg C.</para>
               </section>
               <section>
                  <title>Nonstructural carbon extraction and quantification</title>
                  <para>For total soluble sugar concentration (following Chow and Landhausser,
							2004), 50 mg of tissue was freeze-dried a second time (24 hours; for
							determination of precise weight) and subjected to hot ethanol extraction
							followed by colorimetric analysis with phenol-sulfuric acid. The
							resulting extract was read at 490 nm with a microplate reader (Epoch
							Microplate Spectrophotometer, Bio-Tek Instruments, Winooski, VT, USA)
							with sugar concentration (expressed as mg sugar per g dry wood)
							calculated from a standard curve of 1:1:1 glucose-fructose-galactose
							(Sigma Chemicals, St. Louis, MO, USA).</para>
                  <para>For starch analysis (following Wargo et al., 2002), the remaining
							tissue residue was boiled in KOH followed by neutralization with acetic
							acid and enzymatic digestion with amyloglucosidase. Glucose hydrolyzate
							was determined using a glucose hexokinase kit (Pointe Scientific,
							Canton, MI, USA) and read at 340 nm with the microplate reader. Starch
							concentration (expressed as mg starch per g dry wood) was calculated
							based on glucose standard (Pointe Scientific, Canton, MI, USA)
							curves.</para>
               </section>
               <section>
                  <title>Determination of radiocarbon ages</title>
                  <para>Following Richardson et al. (2013) and Carbone et al. (2013) we used
							the 14C bomb spike to estimate the age of extracted NSC, and in the case
							of root wood, which could not be easily aged by ring counting, to
							estimate the age of the cellulose (i.e. structural C). The bomb spike
							method is based on the fact that above-ground testing of thermonuclear
							weapons between 1955 and 1963 approximately doubled the amount of 14CO2
							in the atmosphere (Levin and Kromer, 2004). Since 1963, when the Limited
							Nuclear Test Ban Treaty was signed, the 14C content of atmospheric CO2
							has decreased through mixing with oceanic and terrestrial C reservoirs,
							and by addition of 14C-free CO2 from fossil fuel burning (Levin et al.,
							2010). The C in photosynthetic products reflects the 14C content of
							atmospheric CO2 in the year assimilation occurred, and hence these
							products are labeled with a unique isotopic signature. Thus, the mean
							14C age of a sample can be determined by measuring its 14C content, and
							comparing this to the atmospheric 14CO2 record.</para>
                  <para>We conducted 14C analysis on sugars and starch extracted following
							Czimczik et al. (2014). Soluble NSC (mostly sugars) was isolated by hot
							water extraction, and insoluble NSC (mostly starch) was isolated by acid
							digestion following lipid removal by boiling in ethanol. The extractions
							were conducted sequentially from each tissue sample. We conducted the
							14C analysis on cellulose extracted using a Soxhlet apparatus (Leavitt
							and Danzer, 1993).</para>
                  <para>For the 14C analysis of both NSC and cellulose, extracts were
							combusted to CO2, purified on a vacuum line, and converted to graphite
							(Xu et al., 2007). Graphite was analyzed for its 14C content at the W.M.
							Keck Carbon Cycle Accelerator Mass Spectrometry facility at UC Irvine
							(Southon et al., 2007).</para>
               </section>
               <section>
                  <title>Data files</title>
                  <para>Table 1. Concentrations (mg per g of oven dry wood) of sugar and
							starch in woody tissues of white pine and red oak. Values are mean and 1
							SD, calculated across the three plate wells read for each sample.</para>
                  <para>Table 2. Radiocarbon age of extracted sugar, starch, and cellulose,
							from tissues of white pine and red oak. Delta 14C was measured at the
							W.M. Keck Carbon Cycle Accelerator Mass Spectrometry facility at UC
							Irvine. Reported uncertainties are 1 SD of the analytical uncertainty.
							14C data were converted to age estimates using the bomb spike method.
							Asterisks denote samples for which multiple extractions were run
							independently.</para>
               </section>
            </description>
         </methodStep>
      </methods>
      <project>
         <title>Harvard Forest Long-Term Ecological Research</title>
         <personnel>
            <organizationName>Harvard Forest</organizationName>
            <address>
               <deliveryPoint>324 North Main Street</deliveryPoint>
               <city>Petersham</city>
               <administrativeArea>MA</administrativeArea>
               <postalCode>01366</postalCode>
               <country>USA</country>
            </address>
            <phone phonetype="voice">(978) 724-3302</phone>
            <phone phonetype="fax">(978) 724-3595</phone>
            <onlineUrl>https://harvardforest.fas.harvard.edu</onlineUrl>
            <userId directory="https://ror.org">https://ror.org/059cpzx98</userId>
            <role>pointOfContact</role>
         </personnel>
         <abstract>The Harvard Forest Long-Term Ecological Research (LTER) program examines ecological dynamics in the New England region resulting from natural disturbances, environmental change, and human impacts.</abstract>
         <funding>National Science Foundation LTER grants: DEB-8811764, DEB-9411975, DEB-0080592, DEB-0620443, DEB-1237491, DEB-1832210.</funding>
      </project>
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               <online>
                  <url function="download">https://harvardforest.fas.harvard.edu/data/p22/hf226/hf226-01-concentrations.csv</url>
               </online>
            </distribution>
         </physical>
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            <attribute id="1421948869614">
               <attributeName>species</attributeName>
               <attributeDefinition>species name</attributeDefinition>
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                        </textDomain>
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                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
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                  <codeExplanation>missing value</codeExplanation>
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               <attributeDefinition>mean concentrations (mg per g of oven dry wood) of sugar in woody
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                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
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            </attribute>
            <attribute id="1421948869661">
               <attributeName>sugar.sd</attributeName>
               <attributeDefinition>standard deviation of concentrations (mg per g of oven dry wood) of sugar
						in woody tissues</attributeDefinition>
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               <attributeName>starch.mean</attributeName>
               <attributeDefinition>mean concentrations (mg per g of oven dry wood) of starch in woody
						tissues</attributeDefinition>
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                        <standardUnit>dimensionless</standardUnit>
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               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
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         <entityName>hf226-02-radiocarbon-age.csv</entityName>
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               <attributeDefinition>extract</attributeDefinition>
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            </attribute>
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               <attributeName>tissue</attributeName>
               <attributeDefinition>tissue sample</attributeDefinition>
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                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
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               </missingValueCode>
            </attribute>
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               </missingValueCode>
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   <additionalMetadata>
      <metadata>
         <additionalClassifications>
            <researchTopic>community</researchTopic>
            <studyType>short-term measurement</studyType>
         </additionalClassifications>
      </metadata>
   </additionalMetadata>
   <additionalMetadata>
      <metadata>
         <additionalLinks>
            <url name=" Nonstructural Carbohydrates in Forest Trees at Harvard Forest 2007-2010">https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=hf176</url>
         </additionalLinks>
      </metadata>
   </additionalMetadata>
</eml:eml>
