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   <dataset id="HF292">
      <alternateIdentifier system="https://doi.org">doi:10.6073/pasta/54f3d3e9429111d446b3f15882e867c6</alternateIdentifier>
      <title>Red-backed Salamanders as Indicators of Hemlock Forest Health at Harvard Forest 2014</title>
      <creator>
         <individualName>
            <givenName>Aaron</givenName>
            <surName>Ellison</surName>
         </individualName>
         <userId directory="https://orcid.org">https://orcid.org/0000-0003-4151-6081</userId>
      </creator>
      <creator>
         <individualName>
            <givenName>Ahmed</givenName>
            <surName>Siddig</surName>
         </individualName>
         <userId directory="https://orcid.org">https://orcid.org/0000-0002-8145-0964</userId>
      </creator>
      <creator>
         <individualName>
            <givenName>Alison</givenName>
            <surName>Ochs</surName>
         </individualName>
      </creator>
      <pubDate>2023</pubDate>
      <language>English</language>
      <abstract>
         <section>
            <para>Species that react quickly to ecological changes are useful indicators for assessing forest health. Red-backed salamanders (Plethodontid cinereus) may be used as an indicator species in declining hemlock forests, allowing for assessment of soil quality and forest health. We hypothesized that decline of hemlock stands due to the effect of hemlock woolly adelgid would negatively impact the abundance of red-backed salamanders by altering soil quality. In the Hemlock Removal Experiment at Harvard Forest, eight-0.8ha plots were treated either with girdling to simulate adelgid invasion, logging to simulate preemptive logging strategies, no treatment in hemlock areas, or no treatment in hardwood areas. Within these treatments in June and July of 2014, P. cinereus relative abundance was determined from coverboard surveys. Soil quality was determined from core samples. Bulk density, pH, carbon-nitrogen ratio, moisture, soil temperature, and litter depth were measured, and ordination was used to create an index of soil quality from these. There was a significant correlation between plot treatment and soil quality (p less than 0.05). Temperature, CN ratio, and pH influenced a strong significant negative correlation between soil quality and salamander abundance (pless than 0.05). Soil quality affected by hemlock decline influenced salamander abundance. These data suggest that we could gain an understanding of forest health and soil quality by examining salamander abundance. Assessing adelgid invasion can be difficult and objective, whereas salamander abundances are easily measured; therefore, we suggest that salamander abundances could be useful in assessing the health of hemlock forest ecosystems.</para>
         </section>
      </abstract>
      <keywordSet>
         <keyword>carbon</keyword>
         <keyword>leaf litter</keyword>
         <keyword>nitrogen</keyword>
         <keyword>salamanders</keyword>
         <keyword>soil chemistry</keyword>
         <keyword>soil moisture</keyword>
         <keyword>soil temperature</keyword>
         <keywordThesaurus>LTER controlled vocabulary</keywordThesaurus>
      </keywordSet>
      <keywordSet>
         <keyword>populations</keyword>
         <keyword>disturbance</keyword>
         <keywordThesaurus>LTER core area</keywordThesaurus>
      </keywordSet>
      <keywordSet>
         <keyword>Harvard Forest</keyword>
         <keyword>HFR</keyword>
         <keyword>LTER</keyword>
         <keyword>USA</keyword>
         <keywordThesaurus>HFR default</keywordThesaurus>
      </keywordSet>
      <intellectualRights>
         <section>
            <para>This dataset is released to the public under Creative Commons CC0 1.0 (No Rights Reserved). Please keep the dataset creators informed of any plans to use the dataset. Consultation with the original investigators is strongly encouraged. Publications and data products that make use of the dataset should include proper acknowledgement.</para>
         </section>
      </intellectualRights>
      <licensed>
         <licenseName>Creative Commons Zero v1.0 Universal</licenseName>
         <url>https://spdx.org/licenses/CC0-1.0.html</url>
         <identifier>CC0-1.0</identifier>
      </licensed>
      <distribution>
         <online>
            <url function="information">https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=hf292</url>
         </online>
      </distribution>
      <coverage>
         <geographicCoverage>
            <geographicDescription>Simes Tract (Harvard Forest). Coordinates based on WGS84 datum.</geographicDescription>
            <boundingCoordinates>
               <westBoundingCoordinate>-72.2182</westBoundingCoordinate>
               <eastBoundingCoordinate>-72.2114</eastBoundingCoordinate>
               <northBoundingCoordinate>+42.4793</northBoundingCoordinate>
               <southBoundingCoordinate>+42.4658</southBoundingCoordinate>
               <boundingAltitudes>
                  <altitudeMinimum>200</altitudeMinimum>
                  <altitudeMaximum>240</altitudeMaximum>
                  <altitudeUnits>meter</altitudeUnits>
               </boundingAltitudes>
            </boundingCoordinates>
         </geographicCoverage>
         <temporalCoverage>
            <rangeOfDates>
               <beginDate>
                  <calendarDate>2014</calendarDate>
               </beginDate>
               <endDate>
                  <calendarDate>2014</calendarDate>
               </endDate>
            </rangeOfDates>
         </temporalCoverage>
         <taxonomicCoverage>
            <taxonomicClassification>
               <taxonRankName>genus</taxonRankName>
               <taxonRankValue>Plethodon</taxonRankValue>
               <taxonomicClassification>
                  <taxonRankName>species</taxonRankName>
                  <taxonRankValue>cinereus</taxonRankValue>
                  <commonName>red-backed salamander</commonName>
               </taxonomicClassification>
            </taxonomicClassification>
            <taxonomicClassification>
               <taxonRankName>genus</taxonRankName>
               <taxonRankValue>Tsuga</taxonRankValue>
               <taxonomicClassification>
                  <taxonRankName>species</taxonRankName>
                  <taxonRankValue>canadensis</taxonRankValue>
                  <commonName>eastern hemlock</commonName>
               </taxonomicClassification>
            </taxonomicClassification>
         </taxonomicCoverage>
      </coverage>
      <maintenance>
         <description>
            <para>complete</para>
         </description>
      </maintenance>
      <contact scope="document">
         <positionName>Information Manager</positionName>
         <organizationName>Harvard Forest</organizationName>
         <address scope="document">
            <deliveryPoint>324 North Main Street</deliveryPoint>
            <city>Petersham</city>
            <administrativeArea>MA</administrativeArea>
            <postalCode>01366</postalCode>
            <country>USA</country>
         </address>
         <phone phonetype="voice">(978) 724-3302</phone>
         <electronicMailAddress>hf-im@lists.fas.harvard.edu</electronicMailAddress>
      </contact>
      <publisher scope="document">
         <organizationName>Harvard Forest</organizationName>
         <address scope="document">
            <deliveryPoint>324 North Main Street</deliveryPoint>
            <city>Petersham</city>
            <administrativeArea>MA</administrativeArea>
            <postalCode>01366</postalCode>
            <country>USA</country>
         </address>
         <phone phonetype="voice">(978) 724-3302</phone>
         <phone phonetype="fax">(978) 724-3595</phone>
         <onlineUrl>https://harvardforest.fas.harvard.edu</onlineUrl>
      </publisher>
      <methods>
         <methodStep>
            <description>
               <section>
                  <title>Soil Collection</title>
                  <para>Soil cores of consistent diameter were taken from 3 randomly chosen sites at each plot. The depth of leaf litter and the length of the soil core was measured in centimeters. By multiplying the diameter of the core by pi and the length of the core we determined the sample volume. We examined the soil to qualitatively determine its texture, and obtained the temperature from a thermometer inserted into the soil near the core. Samples were placed in plastic bags in a cooler and transported to the lab.</para>
               </section>
               <section>
                  <title>Soil Analysis</title>
                  <para>Soil samples were weighed and placed in brown paper bags. We dried the samples at 100*C for 48 hours, then weighed the dried samples. By subtracting the dry weight from the wet weight and dividing the difference by the wet weight, we obtained the soil percent moisture. We divided the dry weight, adjusted to account for the moisture of the bag, by the sample volume to determine the bulk density. The samples were sieved with a 2mm sieve and ground. To measure pH, we mixed 5 grams of soil with 25 mL of deionized water, stirred the solution for 1 minute using a magnetic stirrer, let the solution sit for 30 minutes, repeated the stirring and sitting process, then measured the pH with a pH electrode. C:N ratios were determined from dry combustion analysis of dried, sieved and ground samples of 5 mg.</para>
               </section>
               <section>
                  <title>Salamander Data</title>
                  <para> In each of the 8 plots, coverboards of 100x25x2 centimeters were set up and checked once a week. From the three coverboards in each plot where soil samples were taken, we averaged the number of salamanders found under the board for 6 sessions.</para>
               </section>
            </description>
         </methodStep>
      </methods>
      <project>
         <title>Harvard Forest Long-Term Ecological Research</title>
         <personnel>
            <organizationName>Harvard Forest</organizationName>
            <address>
               <deliveryPoint>324 North Main Street</deliveryPoint>
               <city>Petersham</city>
               <administrativeArea>MA</administrativeArea>
               <postalCode>01366</postalCode>
               <country>USA</country>
            </address>
            <phone phonetype="voice">(978) 724-3302</phone>
            <phone phonetype="fax">(978) 724-3595</phone>
            <onlineUrl>https://harvardforest.fas.harvard.edu</onlineUrl>
            <userId directory="https://ror.org">https://ror.org/059cpzx98</userId>
            <role>pointOfContact</role>
         </personnel>
         <abstract>The Harvard Forest Long-Term Ecological Research (LTER) program examines ecological dynamics in the New England region resulting from natural disturbances, environmental change, and human impacts.</abstract>
         <funding>National Science Foundation LTER grants: DEB-8811764, DEB-9411975, DEB-0080592, DEB-0620443, DEB-1237491, DEB-1832210.</funding>
      </project>
      <dataTable id="hf292-01">
         <entityName>hf292-01-salamander.csv</entityName>
         <entityDescription>plot and salamander abundance data</entityDescription>
         <physical>
            <objectName>hf292-01-salamander.csv</objectName>
            <size unit="byte">1616</size>
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                  <numHeaderLines>1</numHeaderLines>
                  <recordDelimiter>\r\n</recordDelimiter>
                  <attributeOrientation>column</attributeOrientation>
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                     <fieldDelimiter>,</fieldDelimiter>
                  </simpleDelimited>
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            </dataFormat>
            <distribution>
               <online>
                  <url function="download">https://harvardforest.fas.harvard.edu/data/p29/hf292/hf292-01-salamander.csv</url>
               </online>
            </distribution>
         </physical>
         <attributeList>
            <attribute id="1488813998699">
               <attributeName>plot</attributeName>
               <attributeDefinition>plot number</attributeDefinition>
               <measurementScale>
                  <nominal>
                     <nonNumericDomain>
                        <textDomain>
                           <definition>plot number</definition>
                        </textDomain>
                     </nonNumericDomain>
                  </nominal>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998700">
               <attributeName>transect</attributeName>
               <attributeDefinition>transect number in each plot</attributeDefinition>
               <measurementScale>
                  <nominal>
                     <nonNumericDomain>
                        <textDomain>
                           <definition>transect number in each plot</definition>
                        </textDomain>
                     </nonNumericDomain>
                  </nominal>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998701">
               <attributeName>coverboard</attributeName>
               <attributeDefinition>coverboard number in each transect</attributeDefinition>
               <measurementScale>
                  <nominal>
                     <nonNumericDomain>
                        <textDomain>
                           <definition>coverboard number in each transect</definition>
                        </textDomain>
                     </nonNumericDomain>
                  </nominal>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998702">
               <attributeName>treatment</attributeName>
               <attributeDefinition>treatment type</attributeDefinition>
               <measurementScale>
                  <nominal>
                     <nonNumericDomain>
                        <enumeratedDomain>
                           <codeDefinition>
                              <code>HE</code>
                              <definition>hemlock control</definition>
                           </codeDefinition>
                           <codeDefinition>
                              <code>G</code>
                              <definition>girdled</definition>
                           </codeDefinition>
                           <codeDefinition>
                              <code>L</code>
                              <definition>logged</definition>
                           </codeDefinition>
                           <codeDefinition>
                              <code>HW</code>
                              <definition>hardwood control</definition>
                           </codeDefinition>
                        </enumeratedDomain>
                     </nonNumericDomain>
                  </nominal>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998703">
               <attributeName>moisture</attributeName>
               <attributeDefinition>percent soil moisture content of sample</attributeDefinition>
               <measurementScale>
                  <ratio>
                     <unit>
                        <standardUnit>dimensionless</standardUnit>
                     </unit>
                     <precision>0.000000001</precision>
                     <numericDomain>
                        <numberType>real</numberType>
                     </numericDomain>
                  </ratio>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998704">
               <attributeName>bd</attributeName>
               <attributeDefinition>soil bulk density of sample</attributeDefinition>
               <measurementScale>
                  <ratio>
                     <unit>
                        <standardUnit>dimensionless</standardUnit>
                     </unit>
                     <precision>0.000000001</precision>
                     <numericDomain>
                        <numberType>real</numberType>
                     </numericDomain>
                  </ratio>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998705">
               <attributeName>ll.depth</attributeName>
               <attributeDefinition>leaf litter depth</attributeDefinition>
               <measurementScale>
                  <ratio>
                     <unit>
                        <standardUnit>millimeter</standardUnit>
                     </unit>
                     <precision>0.1</precision>
                     <numericDomain>
                        <numberType>real</numberType>
                     </numericDomain>
                  </ratio>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998706">
               <attributeName>temp</attributeName>
               <attributeDefinition>temperature of sample</attributeDefinition>
               <measurementScale>
                  <interval>
                     <unit>
                        <standardUnit>celsius</standardUnit>
                     </unit>
                     <precision>0.1</precision>
                     <numericDomain>
                        <numberType>real</numberType>
                     </numericDomain>
                  </interval>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998707">
               <attributeName>ph</attributeName>
               <attributeDefinition>soil pH</attributeDefinition>
               <measurementScale>
                  <ratio>
                     <unit>
                        <standardUnit>dimensionless</standardUnit>
                     </unit>
                     <precision>0.01</precision>
                     <numericDomain>
                        <numberType>real</numberType>
                     </numericDomain>
                  </ratio>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998708">
               <attributeName>cn</attributeName>
               <attributeDefinition>average carbon-nitrogen ratio of sample</attributeDefinition>
               <measurementScale>
                  <ratio>
                     <unit>
                        <standardUnit>dimensionless</standardUnit>
                     </unit>
                     <precision>0.00000001</precision>
                     <numericDomain>
                        <numberType>real</numberType>
                     </numericDomain>
                  </ratio>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
            <attribute id="1488813998709">
               <attributeName>rbs</attributeName>
               <attributeDefinition>average red-backed salamander abundance under
						coverboard</attributeDefinition>
               <measurementScale>
                  <ratio>
                     <unit>
                        <standardUnit>number</standardUnit>
                     </unit>
                     <precision>0.000000001</precision>
                     <numericDomain>
                        <numberType>real</numberType>
                     </numericDomain>
                  </ratio>
               </measurementScale>
               <missingValueCode>
                  <code>NA</code>
                  <codeExplanation>missing value</codeExplanation>
               </missingValueCode>
            </attribute>
         </attributeList>
         <numberOfRecords>24</numberOfRecords>
      </dataTable>
   </dataset>
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      <metadata>
         <additionalClassifications>
            <researchTopic>plot</researchTopic>
            <researchTopic>community</researchTopic>
            <researchTopic>soil</researchTopic>
            <studyType>short-term measurement</studyType>
         </additionalClassifications>
      </metadata>
   </additionalMetadata>
   <additionalMetadata>
      <metadata>
         <additionalLinks>
            <url name="Air and Soil Temperature in Hemlock Removal Experiment at Harvard Forest since 2004">https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=hf108</url>
            <url name="Ants and Ecosystem Function in Hemlock Removal Experiment at Harvard Forest since 2006">https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=hf160</url>
            <url name="Community and Ecosystem Impacts in Hemlock Removal Experiment at Harvard Forest since 2003">https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=hf054</url>
            <url name="Salamander Abundance at Harvard Forest 2003-2004">https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=hf075</url>
            <url name="Salamander Response in Hemlock Removal Experiment at Harvard Forest 2003-2005">https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=hf038</url>
            <url name="Soil Respiration in Hemlock Removal Experiment at Harvard Forest since 2003">https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=hf130</url>
         </additionalLinks>
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