- Alteio, L. V., Schulz, F., Seshadri, R., Varghese, N., Rodriguez-Reillo, E. R., Goudeau, D., Eichorst, S. A., Malmstrom, R. R., Bowers, R. M., Katz, L. A., Blanchard, J. L., Woyke, T. 2020. Complementary Metagenomic Approaches Improve Reconstruction of Microbial Diversity in a Forest Soil. mSystems 5: e00768-19, 18 pp.
- Brzostek, E. R., Blair, J. M., Dukes, J. S., Frey, S. D., Hobbie, S. E., Melillo, J. M., Mitchell, R. J., Pendall, E., Reich, P. B., Shaver, G. R., Stefanski, A., Tjoelker, M. G., Finzi, A. C. 2012. The effect of experimental warming and precipitation change on proteolytic enzyme activity: positive feedbacks to nitrogen availability are not universal. Global Change Biology 18: 2617-2625.
- Burton, A. J., Melillo, J. M., Frey, S. D. 2008. Adjustment of Forest Ecosystem Root Respiration as Temperature Warms. Journal of Integrative Plant Biology 50: 1462-1483.
- Butler, S. M., Melillo, J. M., Johnson, J. E., Mohan, J. E., Stuedler, P. A., Lux, H., Burrows, E., Smith, R. M., Vario, C. L., Scott, L., Hill, T. D., Aponte*, N., Bowles, F. P. 2011. Soil warming alters nitrogen cycling in a New England forest: implications for ecosystem function and structure. Oecologia 168: 819-828.
- Carey, J. C., Tang, J., Templer, P. H., Kroeger, K. D., Crowther, T. W., Burton, A. J., Dukes, J. S., Emmett, B., Frey, S. D., Heskel, M. A., Jiang, L., Machmuller, M. B., Mohan, J., Panetta, A., Reich, P. B., Reinsch, S., Wang, X., Allison, S. D. , Bamminger, C., Bridgham, S., Collins, S. L., de Dato, G., Eddy, W. C., Enquist, B. J., Estiarte, M., Harte, J., Henderson, A., Johnson, B. R., Steenberg Larsen, K., Luo, Y., Marhan, S., Melillo, J. M., Peñuelas, J., Pfeifer-Meister, L., Poll, C., Rastetter, E., Reinmann, A. B., Reynolds, L. L., Schmidt, I. K., Shaver, G. R., Strong, A. L., Suseela, V., Tietema, A. 2016. Temperature response of soil respiration largely unaltered with experimental warming. PNAS 113: 13797–13802.
- Chari, N. R., Muratore, T. J., Frey, S. D., Winters*, C. L., Martinez*, G., Taylor, B. N. 2024. Long-Term Soil Warming Drives Different Belowground Responses in Arbuscular Mycorrhizal and Ectomycorrhizal Trees. Global Change Biology 30: e17550.
- DeAngelis, K. M., Pold, G., Topcuonglu, B. D., van Diepen, L. T. A., Varney, R., Blanchard, J., Melillo, J. M., Frey, S. D. 2015. Long-term forest soil warming alters microbial communities in temperate forest soils. Frontiers in Microbiology 6: 104.
- DeAngelis, K. M., Priyanka, R. C., Pold, G., Romero Olivares, A., Frey, S. D. 2019. Microbial responses to experimental soil warming: Five testable hypotheses. In: Mohan, J. E., Ecosystem Consequences of Soil Warming, Academic Press, Cambridge.
- Felzer, B., Cronin, T. W., Melillo, J. M., Kicklighter, D. W., Schlosser, C. A. 2009. Importance of carbon-nitrogen interactions and ozone on ecosystem hydrology during the 21st century. Journal of Geophysical Research 114: G01020.
- Finzi, A. C., Giasson, M.-A., Barker Plotkin, A., Aber, J. D., Boose, E. R., Davidson, E. A., Dietze, M. C., Ellison, A. M., Frey, S. D., Goldman, E., Keenan, T. F., Melillo, J. M., Munger, J. W., Nadelhoffer, K. J., Ollinger, S. V., Orwig, D. A., Pederson, N., Richardson, A. D., Savage, K., Tang, J., Thompson, J. R., Williams, C. A., Wofsy, S. C., Zhou, Z., Foster, D. R. 2020. Carbon budget of the Harvard Forest Long-Term Ecological Research site: pattern, process, and response to global change. Ecological Monographs 90: e01423, 37 pp.
- Frey, S. D., Lee, J., Melillo, J. M., Six, J. W. 2013. The temperature response of soil microbial efficiency and its feedback to climate. Nature Climate Change 3: 395-398.
- Giasson, M.-A., Ellison, A. M., Bowden, R. D., Crill, P. M., Davidson, E. A., Drake, J. E., Frey, S. D., Hadley, J. L., Lavine, M., Melillo, J. M., Munger, J. W., Nadelhoffer, K. J., Nicoll, L., Ollinger, S. V., Savage, K., Steudler, P. A., Tang, J., Varner, R. K., Wofsy, S. C., Foster, D. R., Finzi, A. C. 2013. Soil respiration in a northeastern US temperate forest: a 22-year synthesis. Ecosphere 4: article 140.
- Knapp, A. K., Smith, M. D., Hobbie, S. E., Collins, S. L., Fahey, T. J., Hansen, G. J. A., Landis, D. A., La Pierre, K. L., Melillo, J. M., Seastedt, T. R., Shaver, G. R., Webster, J. R. 2012. Past, Present, and Future Roles of Long-Term Experiments in the LTER Network. BioScience 62: 377-389.
- LaCroix, R. E., Walpen, N., Sander, M., Tfaily, M. M., Blanchard, J. L., Keiluweit, M. 2021. Long-Term Warming Decreases Redox Capacity of Soil Organic Matter. Environmental Science and Technology Letters 8: 92-97.
- Li, J., Wang, G., Mayes, M. A., Allison, S. D., Frey, S. D., Shi, Z., Hu, X., Luo, Y., Melillo, J. M. 2019. Reduced carbon use efficiency and increased microbial turnover with soil warming. Global Change Biology 25: 900-910.
- Melillo, J. M., Kicklighter, D. W., Tian, H., Butler, S. 2010. Fertilizing Change: Carbon-Nitrogen Interactions and Carbon Storage in Land Ecosystems. In: Hillel, D., Rosenzweig, C., Handbook of Climate Change and Agroecosystems: Impacts, Adaptation, and Mitigation, Imperial College Press, London, England.
- Morrison, E. W., Pringle, A., Van Diepen, L. T. A., Grandy, A. S., Melillo, J. M., Frey, S. D. 2019. Warming alters fungal communities and litter chemistry with implications for soil carbon stocks. Soil Biology and Biochemistry 132: 120-130.
- Pold, G., Billings, A. F., Blanchard, J. L., Burkhardt, D. B., Frey, S. D., Melillo, J. M., Schnabel, J., van Diepen, L. T. A., DeAngelis, K. M. 2016. Long-term warming alters carbohydrate degradation potential in temperate forest soils. Applied and Environmental Microbiology 82: 6518-6530.
- San Román, A. X., Srikanthan, N., Hamid, A. A., Muratore, T. J., Knorr, M. A., Frey, S. D., Simpson, M. J. 2024. Long-term warming in a temperate forest accelerates soil organic matter decomposition despite increased plant-derived inputs. Biogeochemistry 167: 1159-1174.
- Schnabel, J. 2016. Microbial community response to long-term warming in temperate forest soils. Thesis, University of Massachusetts.
- Van Diepen, L. T. A., Frey, S. D., Sthultz, C. M., Morrison, E. W., Minocha, R., Pringle, A. 2015. Changes in litter quality caused by simulated nitrogen deposition reinforce the N-induced suppression of litter decay. Ecosphere 6: art205.
- Werner, W. J., Sanderman, J., Melillo, J. M. 2020. Decreased Soil Organic Matter in a Long‐Term Soil Warming Experiment Lowers Soil Water Holding Capacity and Affects Soil Thermal and Hydrological Buffering. Journal of Geophysical Research - Biogeosciences 125: article e2019JG005158, 14 pp.
- Wieder, W. R., Pierson, D., Earl, S., Lajtha, K., Baer, S. G., Ballantyne, S., Berhe, A. A., Billings, S. A., Brigham, L. M., Chacon, S. S., Fraterrigo, J., Frey, S. D., Georgiou, K, de Graaff, M., Grandy, A. S., Hartman, M. D., Hobbie, S. E., Johnson, C., Kaye, J., Kyker-Snowman, E., Litvak, M. E., Mack, M. C., Malhotra, A., Moore, J. A. M., Nadelhoffer, K., Rasmussen, C., Silver, W. L., Sulman. B. N., Walker. X., Weintraub, S. 2021. SoDaH: the SOils DAta Harmonization database, an open-source synthesis of soil data from research networks, version 1.0. Earth System Science Data 13: 1843–1854.
- Zhou, Y., Tang, J., Melillo, J. M., Butler, S., Mohan, J. 2011. Root standing crop and chemistry after six years of soil warming in a temperate forest. Tree Physiology 31: 707-717.