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- Duveneck, M. J., Thompson, J. R., Gustafson, E. J., Liang, Y., de Bruijn, A. M. G. 2017. Recovery dynamics and climate change effects to future New England forests. Landscape Ecology 32: 1385-1397.
- Duveneck, M., Thompson, J. R. 2017. Climate change imposes phenological trade-offs on forest net primary productivity. Journal of Geophysical Research: Biogeosciences 122: 2298-2313.
- Duveneck, M., Thompson, J. R. 2019. Social and biophysical determinants of future forest conditions in New England: Effects of a modern land-use regime. Global Environmental Change 55: 115-129.
- Liang, Y., Duveneck, M., Gustafson, E. J., Serra-Diaz, J. M., Thompson, J. R. 2018. How disturbance, competition, and dispersal interact to prevent tree range boundaries from keeping pace with climate change. Global Change Biology 24: 335-351.
- Liang, Y., Gustafson, E. J., He, H. S., Serra-Diaz, J. M., Duveneck, M. J., Thompson, J. R. 2023. What is the role of disturbance in catalyzing spatial shifts in forest composition and tree species biomass under climate change?. Global Change Biology 29: 1160– 1177.
- McKenzie*, P., Duveneck, M. J., Morreale, L. L., Thompson, J. R. 2019. Local and global parameter sensitivity within an ecophysiologically based forest landscape model. Environmental Modelling & Software 117: 1-13.
- Pearman-Gillman, S. B., Duveneck, M. J., Murdoch, J. D., Donovan, T. M. 2020. Wildlife resistance and protection in a changing New England landscape. PloS ONE 15: e0239525, 22 pp.
- Thompson, J. R., Laflower, D. M., Plisinski, J. S., MacLean, M. G., Chu, H., Carpenter, D., Antos, K., Cooper, S., Gaertner, K., Judge, M., Mittelman, M., Ryor, J., Van Doren, W. 2025. Forest Carbon Study: The Impact of Alternative Land-use Scenarios on Terrestrial Carbon Storage and Sequestration in Massachusetts.
- Thompson, J. R., Laflower, D., Plisinski, J., MacLean, M. G. 2020. Land Sector Report: A Technical Report of the Massachusetts 2050 Decarbonization Roadmap Study.